recipe bioconductor-synergyfinder

Calculate and Visualize Synergy Scores for Drug Combinations

Homepage

https://bioconductor.org/packages/3.11/bioc/html/synergyfinder.html

License

Mozilla Public License 2.0

Recipe

/bioconductor-synergyfinder/meta.yaml

Links

biotools: synergyfinder, doi: 10.1093/bioinformatics/btx162

Efficient implementations for all the popular synergy scoring models for drug combinations, including HSA, Loewe, Bliss and ZIP and visualization of the synergy scores as either a two-dimensional or a three-dimensional interaction surface over the dose matrix.

package bioconductor-synergyfinder

(downloads) docker_bioconductor-synergyfinder

Versions

2.2.0-02.0.1-01.10.2-01.10.0-01.8.0-01.6.1-01.4.0-01.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-synergyfinder

and update with:

conda update bioconductor-synergyfinder

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-synergyfinder:<tag>

(see bioconductor-synergyfinder/tags for valid values for <tag>)