recipe bioconductor-target

Predict Combined Function of Transcription Factors

Homepage

https://bioconductor.org/packages/3.11/bioc/html/target.html

License

GPL-3

Recipe

/bioconductor-target/meta.yaml

Implement the BETA algorithm for infering direct target genes from DNA-binding and perturbation expression data Wang et al. (2013) <doi: 10.1038/nprot.2013.150>. Extend the algorithm to predict the combined function of two DNA-binding elements from comprable binding and expression data.

package bioconductor-target

(downloads) docker_bioconductor-target

Versions

1.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-target

and update with:

conda update bioconductor-target

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-target:<tag>

(see bioconductor-target/tags for valid values for <tag>)