recipe bioconductor-tenxbusdata

Single cell dataset from 10x in BUS format

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/TENxBUSData.html

License:

BSD_2_clause + file LICENSE

Recipe:

/bioconductor-tenxbusdata/meta.yaml

Download Barcode, UMI, and Set (BUS) format of 10x datasets from within R. This package accompanies the package BUSpaRse, which can load BUS format into R as a sparse matrix, and which has utility functions related to using the C++ command line package bustools.

package bioconductor-tenxbusdata

Versions:

1.12.0-0,  1.8.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.1-0,  1.0.0-0

Depends:

• bioconductor-annotationhub >=3.6.0,<3.7.0

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-data-packages >=20221108

• bioconductor-experimenthub >=2.6.0,<2.7.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-tenxbusdata

and update with:

conda update bioconductor-tenxbusdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tenxbusdata:<tag>

(see bioconductor-tenxbusdata/tags for valid values for <tag>)

Download stats

Link to this page

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