recipe bioconductor-tissuetreg

TWGBS and RNA-seq data from tissue T regulatory cells from mice

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/tissueTreg.html

License:

GPL (>= 2)

Recipe:

/bioconductor-tissuetreg/meta.yaml

The package provides ready to use epigenomes (obtained from TWGBS) and transcriptomes (RNA-seq) from various tissues as obtained in the study (Delacher and Imbusch 2017, PMID: 28783152). Regulatory T cells (Treg cells) perform two distinct functions: they maintain self-tolerance, and they support organ homeostasis by differentiating into specialized tissue Treg cells. The underlying dataset characterises the epigenetic and transcriptomic modifications for specialized tissue Treg cells.

package bioconductor-tissuetreg

(downloads) docker_bioconductor-tissuetreg

Versions:
1.17.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.10.0-0,  1.9.0-0,  1.8.0-0,  1.6.0-0, 

1.17.0-0,  1.14.0-1,  1.14.0-0,  1.12.0-0,  1.10.0-1,  1.10.0-0,  1.9.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-tissuetreg

and update with:

conda update bioconductor-tissuetreg

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tissuetreg:<tag>

(see bioconductor-tissuetreg/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tissuetreg/README.html)