recipe bioconductor-tnt

A R interface to the TnT javascript library (https://github.com/ tntvis) to provide interactive and flexible visualization of track-based genomic data.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/TnT.html

License

AGPL-3

Recipe

/bioconductor-tnt/meta.yaml

package bioconductor-tnt

Versions

1.6.0-1, 1.4.0-0

Depends

• bioconductor-biobase >=2.44.0,<2.45.0

• bioconductor-genomeinfodb >=1.20.0,<1.21.0

• bioconductor-genomicranges >=1.36.0,<1.37.0

• bioconductor-iranges >=2.18.0,<2.19.0

• bioconductor-s4vectors >=0.22.0,<0.23.0

• r-base >=3.6,<3.7.0a0

• r-data.table

• r-htmlwidgets

• r-jsonlite

• r-knitr

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tnt

and update with:

conda update bioconductor-tnt

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tnt:<tag>

(see bioconductor-tnt/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tnt/README.html)