recipe bioconductor-tracktables

Methods to create complex IGV genome browser sessions and dynamic IGV reports in HTML pages.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/tracktables.html

License

GPL (>= 3)

Recipe

/bioconductor-tracktables/meta.yaml

Links

biotools: tracktables, doi: 10.1038/nmeth.3252

package bioconductor-tracktables

(downloads) docker_bioconductor-tracktables

Versions

1.16.0-0, 1.14.0-0, 1.12.0-0

Depends bioconductor-genomicranges

>=1.34.0,<1.35.0

Depends bioconductor-iranges

>=2.16.0,<2.17.0

Depends bioconductor-rsamtools

>=1.34.0,<1.35.0

Depends bioconductor-xvector

>=0.22.0,<0.23.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-rcolorbrewer

Depends r-stringr

Depends r-tractor.base

Depends r-xml

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tracktables

and update with:

conda update bioconductor-tracktables

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tracktables:<tag>

(see bioconductor-tracktables/tags for valid values for <tag>)