bioconductor-treeio

downloads

Base classes and functions for parsing and exporting phylogenetic trees. ‘treeio’ supports parsing analysis findings from commonly used software packages, allows linking external data to phylogeny and merging tree data obtained from different sources. It also supports exporting phylogenetic tree with heterogeneous associated data to a single tree file.

Home http://bioconductor.org/packages/3.7/bioc/html/treeio.html
Versions 1.0.2, 1.2.0, 1.2.1, 1.4.3
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-treeio

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-treeio

and update with:

conda update bioconductor-treeio

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-treeio.