recipe bioconductor-treesummarizedexperiment

TreeSummarizedExperiment: a S4 Class for Data with Tree Structures

Homepage

https://bioconductor.org/packages/3.11/bioc/html/TreeSummarizedExperiment.html

License

GPL (>=2)

Recipe

/bioconductor-treesummarizedexperiment/meta.yaml

TreeSummarizedExperiment has extended SingleCellExperiment to include hierarchical information on the rows or columns of the rectangular data.

package bioconductor-treesummarizedexperiment

Versions

1.4.0-0, 1.2.0-0, 1.0.3-0

Depends

• bioconductor-s4vectors >=0.26.0,<0.27.0

• bioconductor-singlecellexperiment >=1.10.0,<1.11.0

• bioconductor-summarizedexperiment >=1.18.0,<1.19.0

• r-ape

• r-base >=4.0,<4.1.0a0

• r-dplyr

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-treesummarizedexperiment

and update with:

conda update bioconductor-treesummarizedexperiment

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-treesummarizedexperiment:<tag>

(see bioconductor-treesummarizedexperiment/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-treesummarizedexperiment/README.html)