bioconductor-triplex

downloads

This package provides functions for identification and visualization of potential intramolecular triplex patterns in DNA sequence. The main functionality is to detect the positions of subsequences capable of folding into an intramolecular triplex (H-DNA) in a much larger sequence. The potential H-DNA (triplexes) should be made of as many cannonical nucleotide triplets as possible. The package includes visualization showing the exact base-pairing in 1D, 2D or 3D.

Home http://bioconductor.org/packages/3.6/bioc/html/triplex.html
Versions 1.16.0, 1.18.0
License BSD_2_clause + file LICENSE
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-triplex

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-triplex

and update with:

conda update bioconductor-triplex

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-triplex.