recipe bioconductor-tscan

TSCAN: Tools for Single-Cell ANalysis

Homepage

https://bioconductor.org/packages/3.11/bioc/html/TSCAN.html

License

GPL(>=2)

Recipe

/bioconductor-tscan/meta.yaml

Links

biotools: tscan, doi: 10.1093/nar/gkw430

TSCAN enables users to easily construct and tune pseudotemporal cell ordering as well as analyzing differentially expressed genes. TSCAN comes with a user-friendly GUI written in shiny. More features will come in the future.

package bioconductor-tscan

(downloads) docker_bioconductor-tscan

Versions

1.26.0-0, 1.24.0-0, 1.22.0-1, 1.22.0-0, 1.20.0-0, 1.18.0-0, 1.16.0-0, 1.14.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tscan

and update with:

conda update bioconductor-tscan

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tscan:<tag>

(see bioconductor-tscan/tags for valid values for <tag>)