bioconductor-tscan

downloads

TSCAN enables users to easily construct and tune pseudotemporal cell ordering as well as analyzing differentially expressed genes. TSCAN comes with a user-friendly GUI written in shiny. More features will come in the future.

Home http://bioconductor.org/packages/3.6/bioc/html/TSCAN.html
Versions 1.14.0, 1.16.0
License GPL(>=2)
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-tscan

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tscan

and update with:

conda update bioconductor-tscan

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-tscan.