recipe bioconductor-tweedeseq

RNA-seq data analysis using the Poisson-Tweedie family of distributions

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/tweeDEseq.html

License:

GPL (>= 2)

Recipe:

/bioconductor-tweedeseq/meta.yaml

Links:

biotools: tweedeseq

Differential expression analysis of RNA-seq using the Poisson-Tweedie family of distributions.

package bioconductor-tweedeseq

Versions:

1.44.0-0,  1.40.0-2,  1.40.0-1,  1.40.0-0,  1.38.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-0, 

1.44.0-0,  1.40.0-2,  1.40.0-1,  1.40.0-0,  1.38.0-0,  1.36.0-1,  1.36.0-0,  1.34.0-0,  1.32.0-0,  1.30.0-1,  1.30.0-0,  1.28.1-0,  1.28.0-0,  1.26.0-0,  1.24.0-0,  1.22.0-0

Depends:

• bioconductor-cqn >=1.44.0,<1.45.0

• bioconductor-edger >=3.40.0,<3.41.0

• bioconductor-limma >=3.54.0,<3.55.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

• r-mass

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-tweedeseq

and update with:

conda update bioconductor-tweedeseq

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tweedeseq:<tag>

(see bioconductor-tweedeseq/tags for valid values for <tag>)

Download stats

Link to this page

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