recipe bioconductor-tximeta

Transcript quantification import from Salmon with automatic population of metadata and transcript ranges. Filtered, combined, or de novo transcriptomes can be linked to the appropriate sources with linkedTxomes and shared for reproducible analyses.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/tximeta.html

License

GPL-2

Recipe

/bioconductor-tximeta/meta.yaml

package bioconductor-tximeta

(downloads) docker_bioconductor-tximeta

Versions

1.2.2-0, 1.0.3-0, 1.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tximeta

and update with:

conda update bioconductor-tximeta

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tximeta:<tag>

(see bioconductor-tximeta/tags for valid values for <tag>)