recipe bioconductor-tximeta

Transcript Quantification Import with Automatic Metadata

Homepage

https://bioconductor.org/packages/3.11/bioc/html/tximeta.html

License

GPL-2

Recipe

/bioconductor-tximeta/meta.yaml

Transcript quantification import from Salmon and alevin with automatic attachment of transcript ranges and release information, and other associated metadata. De novo transcriptomes can be linked to the appropriate sources with linkedTxomes and shared for computational reproducibility.

package bioconductor-tximeta

(downloads) docker_bioconductor-tximeta

Versions

1.6.2-01.4.3-01.4.0-01.2.2-01.0.3-01.0.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-tximeta

and update with:

conda update bioconductor-tximeta

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tximeta:<tag>

(see bioconductor-tximeta/tags for valid values for <tag>)