recipe bioconductor-tximportdata

tximportData

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/tximportData.html

License:

GPL (>= 2)

Recipe:

/bioconductor-tximportdata/meta.yaml

This package provides the output of running various transcript abundance quantifiers on a set of 6 RNA-seq samples from the GEUVADIS project. The quantifiers were Cufflinks, RSEM, kallisto, Salmon and Sailfish. alevin example output is also included. Forr details on version numbers, sample information, and details on calls, see the package vignette.

package bioconductor-tximportdata

(downloads) docker_bioconductor-tximportdata

Versions:
1.25.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.17.0-0,  1.16.0-0,  1.14.0-0, 

1.25.0-0,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.17.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.12.0-0,  1.10.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-tximportdata

and update with:

conda update bioconductor-tximportdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-tximportdata:<tag>

(see bioconductor-tximportdata/tags for valid values for <tag>)

Download stats

Link to this page

Render an install-with-bioconda badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-tximportdata/README.html)