bioconductor-undo

downloads

UNDO is an R package for unsupervised deconvolution of tumor and stromal mixed expression data. It detects marker genes and deconvolutes the mixing expression data without any prior knowledge.

Home http://bioconductor.org/packages/3.7/bioc/html/UNDO.html
Versions 1.22.0, 1.20.0
License GPL-2
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-undo
Links biotools: undo, doi: 10.1093/bioinformatics/btu607

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-undo

and update with:

conda update bioconductor-undo

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-undo.