recipe bioconductor-variancepartition

Quantify and interpret drivers of variation in multilevel gene expression experiments

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/variancePartition.html

License:

GPL-2

Recipe:

/bioconductor-variancepartition/meta.yaml

Links:

biotools: variancepartition

Quantify and interpret multiple sources of biological and technical variation in gene expression experiments. Uses a linear mixed model to quantify variation in gene expression attributable to individual, tissue, time point, or technical variables. Includes dream differential expression analysis for repeated measures.

package bioconductor-variancepartition

(downloads) docker_bioconductor-variancepartition

Versions:
1.28.0-01.24.0-01.22.0-01.20.0-11.20.0-01.18.0-01.16.0-01.14.1-01.14.0-1

1.28.0-01.24.0-01.22.0-01.20.0-11.20.0-01.18.0-01.16.0-01.14.1-01.14.0-11.12.3-01.12.0-01.10.4-01.8.1-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-variancepartition

and update with:

conda update bioconductor-variancepartition

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-variancepartition:<tag>

(see bioconductor-variancepartition/tags for valid values for <tag>)

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