recipe bioconductor-variantfiltering

Filter genetic variants using different criteria such as inheritance model, amino acid change consequence, minor allele frequencies across human populations, splice site strength, conservation, etc.

Homepage

https://bioconductor.org/packages/3.8/bioc/html/VariantFiltering.html

License

Artistic-2.0

Recipe

/bioconductor-variantfiltering/meta.yaml

Links

biotools: variantfiltering, doi: 10.1038/nmeth.3252

package bioconductor-variantfiltering

(downloads) docker_bioconductor-variantfiltering

Versions

1.18.0-0, 1.16.0-0, 1.14.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-variantfiltering

and update with:

conda update bioconductor-variantfiltering

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-variantfiltering:<tag>

(see bioconductor-variantfiltering/tags for valid values for <tag>)