-
recipe
bioconductor-vidger
Create rapid visualizations of RNAseq data in R
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/vidger.html
- License
GPL-3 | file LICENSE
- Recipe
The aim of vidger is to rapidly generate information-rich visualizations for the interpretation of differential gene expression results from three widely-used tools: Cuffdiff, DESeq2, and edgeR.
-
package
bioconductor-vidger
¶ -
- Versions
1.10.0-0
,1.8.0-0
,1.6.0-0
,1.4.0-1
,1.2.0-0
- Depends
bioconductor-biobase
>=2.50.0,<2.51.0
bioconductor-deseq2
>=1.30.0,<1.31.0
bioconductor-edger
>=3.32.0,<3.33.0
bioconductor-summarizedexperiment
>=1.20.0,<1.21.0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-vidger
and update with:
conda update bioconductor-vidger
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-vidger:<tag>
(see bioconductor-vidger/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-vidger/README.html)