-
recipe
bioconductor-waddr
Statistical tests for detecting differential distributions based on the 2-Wasserstein distance
- Homepage
- License
MIT + file LICENSE
- Recipe
The package offers statistical tests based on the 2-Wasserstein distance for detecting and characterizing differences between two distributions given in the form of samples. Functions for calculating the 2-Wasserstein distance and testing for differential distributions are provided, as welll as specifically tailored test for differential expression in single-cell RNA sequencing data.
-
package
bioconductor-waddr
¶ -
- Versions
1.4.0-0
,1.2.0-0
,1.0.0-0
- Depends
bioconductor-biocfilecache
>=1.14.0,<1.15.0
bioconductor-biocparallel
>=1.24.0,<1.25.0
bioconductor-singlecellexperiment
>=1.12.0,<1.13.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=7.5.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=7.5.0
r-arm
>=1.10-1
r-base
>=4.0,<4.1.0a0
r-rcpp
>=1.0.1
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-waddr
and update with:
conda update bioconductor-waddr
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-waddr:<tag>
(see bioconductor-waddr/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-waddr/README.html)