recipe bioconductor-webbioc

An integrated web interface for doing microarray analysis using several of the Bioconductor packages. It is intended to be deployed as a centralized bioinformatics resource for use by many users. (Currently only Affymetrix oligonucleotide analysis is supported.)

Homepage

https://bioconductor.org/packages/3.9/bioc/html/webbioc.html

License

GPL (>= 2)

Recipe

/bioconductor-webbioc/meta.yaml

Links

biotools: webbioc, doi: 10.1007/0-387-29362-0_18

package bioconductor-webbioc

(downloads) docker_bioconductor-webbioc

Versions

1.54.0-0, 1.52.0-0, 1.50.0-0

Depends bioconductor-affy

>=1.60.0,<1.61.0

Depends bioconductor-annaffy

>=1.54.0,<1.55.0

Depends bioconductor-biobase

>=2.42.0,<2.43.0

Depends bioconductor-gcrma

>=2.54.0,<2.55.0

Depends bioconductor-multtest

>=2.38.0,<2.39.0

Depends bioconductor-qvalue

>=2.14.0,<2.15.0

Depends bioconductor-vsn

>=3.50.0,<3.51.0

Depends r-base

>=3.5.1,<3.5.2.0a0

Depends r-biocmanager

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-webbioc

and update with:

conda update bioconductor-webbioc

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-webbioc:<tag>

(see bioconductor-webbioc/tags for valid values for <tag>)