- recipe bioconductor-xtrasnplocs.hsapiens.dbsnp144.grch37
Extra SNP locations for Homo sapiens (dbSNP Build 144)
- Homepage:
- License:
Artistic-2.0
- Recipe:
/bioconductor-xtrasnplocs.hsapiens.dbsnp144.grch37/meta.yaml
Extra SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 144. The source data files used for this package were created by NCBI on May 29-30, 2015, and contain SNPs mapped to reference genome GRCh37.p13 (a patched version of GRCh37 that doesn't alter chromosomes 1-22, X, Y, MT). While the SNPlocs.Hsapiens.dbSNP144.GRCh37 package contains only molecular variations of class "snp", this package contains molecular variations of other classes (in-del, heterozygous, microsatellite, named-locus, no-variation, mixed, and multinucleotide-polymorphism).
- package bioconductor-xtrasnplocs.hsapiens.dbsnp144.grch37¶
-
- Versions:
0.99.12-10
,0.99.12-9
,0.99.12-8
,0.99.12-7
,0.99.12-6
,0.99.12-5
,0.99.12-4
,0.99.12-3
,0.99.12-2
,0.99.12-10
,0.99.12-9
,0.99.12-8
,0.99.12-7
,0.99.12-6
,0.99.12-5
,0.99.12-4
,0.99.12-3
,0.99.12-2
,0.99.12-0
- Depends:
bioconductor-biocgenerics
>=0.44.0,<0.45.0
bioconductor-bsgenome
>=1.66.0,<1.67.0
bioconductor-data-packages
>=20221103
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-xtrasnplocs.hsapiens.dbsnp144.grch37
and update with:
conda update bioconductor-xtrasnplocs.hsapiens.dbsnp144.grch37
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-xtrasnplocs.hsapiens.dbsnp144.grch37:<tag>
(see bioconductor-xtrasnplocs.hsapiens.dbsnp144.grch37/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
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