bloocoo

downloads

Bloocoo is a k-mer spectrum-based read error corrector, designed to correct large datasets with a very low memory footprint. As an example, it can correct whole human genome re-sequencing reads at 70 x coverage with less than 4GB of memory.

Home http://gatb.inria.fr/software/bloocoo/
Versions 1.0.7
License aGPL v3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bloocoo

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bloocoo

and update with:

conda update bloocoo

docker

A Docker container is available at https://quay.io/repository/biocontainers/bloocoo.