-
recipe
bowtie2
Fast and sensitive gapped read alignment
- Homepage
- License
GPL-3.0-only
- Recipe
- Links
biotools: bowtie2, doi: 10.1038/nmeth.1923, debian: bowtie2, usegalaxy-eu: bowtie2
-
package
bowtie2
¶ -
- Versions
2.4.2-1
,2.4.2-0
,2.4.1-3
,2.4.1-2
,2.4.1-1
,2.4.1-0
,2.3.5.1-0
,2.3.5-0
,2.3.4.3-1
,2.4.2-1
,2.4.2-0
,2.4.1-3
,2.4.1-2
,2.4.1-1
,2.4.1-0
,2.3.5.1-0
,2.3.5-0
,2.3.4.3-1
,2.3.4.3-0
,2.3.4.2-0
,2.3.4.1-1
,2.3.4.1-0
,2.3.4-0
,2.3.3.1-0
,2.3.2-1
,2.3.0-1
,2.3.0-0
,2.2.8-2
,2.2.8-1
,2.2.8-0
,2.2.7-1
,2.2.7-0
,2.2.6-0
,2.2.5-7
,2.2.5-6
,2.2.5-5
,2.2.5-4
,2.2.5-3
,2.2.5-2
,2.2.5-1
,2.2.4-7
,2.2.4-6
,2.2.4-5
,2.2.4-4
,2.2.4-3
,2.2.4-2
,2.2.4-1
,2.2.4-0
,2.2.1-4
,2.2.1-3
,2.2.1-2
,2.2.1-1
,2.2.1-0
- Depends
libgcc-ng
>=7.5.0
libstdcxx-ng
>=7.5.0
python
>=3.6,<3.7.0a0
python_abi
3.6.* *_cp36m
tbb
>=2020.2
zlib
>=1.2.11,<1.3.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bowtie2
and update with:
conda update bowtie2
or use the docker container:
docker pull quay.io/biocontainers/bowtie2:<tag>
(see bowtie2/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bowtie2/README.html)