recipe bowtie2

Fast and sensitive read alignment

Homepage

http://bowtie-bio.sourceforge.net/bowtie2/index.shtml

License

GPLv3

Recipe

/bowtie2/meta.yaml

Links

biotools: bowtie2, doi: 10.1038/nmeth.1923, debian: bowtie2

package bowtie2

(downloads) docker_bowtie2

Versions
2.4.1-32.4.1-22.4.1-12.4.1-02.3.5.1-02.3.5-02.3.4.3-12.3.4.3-02.3.4.2-0

2.4.1-32.4.1-22.4.1-12.4.1-02.3.5.1-02.3.5-02.3.4.3-12.3.4.3-02.3.4.2-02.3.4.1-12.3.4.1-02.3.4-02.3.3.1-02.3.2-12.3.0-12.3.0-02.2.8-22.2.8-12.2.8-02.2.7-12.2.7-02.2.6-02.2.5-72.2.5-62.2.5-52.2.5-42.2.5-32.2.5-22.2.5-12.2.4-72.2.4-62.2.4-52.2.4-42.2.4-32.2.4-22.2.4-12.2.4-02.2.1-42.2.1-32.2.1-22.2.1-12.2.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bowtie2

and update with:

conda update bowtie2

or use the docker container:

docker pull quay.io/biocontainers/bowtie2:<tag>

(see bowtie2/tags for valid values for <tag>)