- recipe bracken
Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.
- Homepage:
- License:
GPL-3.0
- Recipe:
- Links:
biotools: Bracken, doi: 10.7717/peerj-cs.104
- package bracken¶
-
- Versions:
2.8-0
,2.7-0
,2.6.2-0
,2.6.1-3
,2.6.1-2
,2.6.1-1
,2.6.1-0
,2.6.0-2
,2.6.0-1
,2.8-0
,2.7-0
,2.6.2-0
,2.6.1-3
,2.6.1-2
,2.6.1-1
,2.6.1-0
,2.6.0-2
,2.6.0-1
,2.6.0-0
,2.5.3-0
,2.5.2-0
,2.5-2
,2.5-1
,2.5-0
,2.2-1
,2.2-0
,1.0.0-1
,1.0.0-0
- Depends:
_openmp_mutex
>=4.5
libgcc-ng
>=12
libstdcxx-ng
>=12
python
>=2.7,<2.8.0a0
python_abi
2.7.* *_cp27mu
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bracken
and update with:
conda update bracken
or use the docker container:
docker pull quay.io/biocontainers/bracken:<tag>
(see bracken/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bracken/README.html)