bracken

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Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

Home https://github.com/jenniferlu717/Bracken
Versions 1.0.0
License GPL-3.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bracken

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bracken

and update with:

conda update bracken

docker

A Docker container is available at https://quay.io/repository/biocontainers/bracken.