recipe brockman-pipeline

Brockman Representation Of Chromatin by K-mers in Mark-Associated Nucleotides

Homepage:

https://github.com/Carldeboer/Brockman

License:

GPL-3.0

Recipe:

/brockman-pipeline/meta.yaml

package brockman-pipeline

Versions:

1.0-4,  1.0-3,  1.0-2,  1.0-1,  1.0-0

Depends:

• amused

• bedtools

• bowtie2

• bzip2

• jemalloc

• ncurses

• ruby >=2.4

• ruby-dna-tools

• samtools

• trimmomatic

• ucsc-twobittofa

• zlib

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install brockman-pipeline

and update with:

conda update brockman-pipeline

or use the docker container:

docker pull quay.io/biocontainers/brockman-pipeline:<tag>

(see brockman-pipeline/tags for valid values for <tag>)

Download stats

Link to this page

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