recipe cgat-report

A report generator in python based on sphinx

Homepage:

https://github.com/AndreasHeger/CGATReport

License:

BSD

Recipe:

/cgat-report/meta.yaml

package cgat-report

versions:

0.9.1-0,  0.9.0-0,  0.8.4-0,  0.8.1-0,  0.8.0-1,  0.8.0-0,  0.7.6.1-1,  0.3.7-1,  0.3.7-0

depends bokeh:

depends docutils:

depends future:

depends matplotlib-base:

>=2.0

depends matplotlib-venn:

depends nose:

depends numpy:

depends openpyxl:

depends pandas:

depends pillow:

depends python:

depends scipy:

depends seaborn:

depends six:

depends sphinx:

depends sqlalchemy:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install cgat-report

and update with::

   mamba update cgat-report

To create a new environment, run:

mamba create --name myenvname cgat-report

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/cgat-report:<tag>

(see `cgat-report/tags`_ for valid values for ``<tag>``)

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