recipe chiron

A deep neural network basecaller for nanopore sequencing.

Homepage

https://github.com/haotianteng/chiron

License

OTHER / Mozilla Public License 2.0 (MPL 2.0)

Recipe

/chiron/meta.yaml

Links

doi: 10.1093/gigascience/giy037, biotools: Chiron

package chiron

(downloads) docker_chiron

Versions

0.6.1.1-00.6.1-00.4.2.1-10.4.2.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install chiron

and update with:

conda update chiron

or use the docker container:

docker pull quay.io/biocontainers/chiron:<tag>

(see chiron/tags for valid values for <tag>)

Notes

conda-forge::tensorflow requires GLIBC >=2.16. It should be present on most, but not all systems. See https://github.com/conda-forge/tensorflow-feedstock/issues/67