recipe cnvkit

Copy number variant detection from high-throughput sequencing

Homepage

https://github.com/etal/cnvkit

License

Apache License 2.0

Recipe

/cnvkit/meta.yaml

Links

biotools: cnvkit, doi: 10.1371/journal.pcbi.1004873

package cnvkit

(downloads) docker_cnvkit

Versions
0.9.7-10.9.7-00.9.6-20.9.6-10.9.6-00.9.6a0-20.9.6a0-10.9.6a0-00.9.5-1

0.9.7-10.9.7-00.9.6-20.9.6-10.9.6-00.9.6a0-20.9.6a0-10.9.6a0-00.9.5-10.9.5-00.9.4a0-00.9.3-20.9.2-20.9.2a0-20.9.2a0-10.9.2a0-00.9.1-00.9.1a0-00.9.0-00.8.6a0-20.8.6a0-10.8.6a0-00.8.5-00.8.5dev0-10.8.5dev0-00.8.4-00.8.3a0-10.8.3a0-00.8.2-00.8.1-00.8.0-00.7.11-00.7.10-10.7.10-00.7.9-00.7.8-10.7.8-00.7.7-00.7.6-00.7.5-00.7.4-10.7.4-00.7.3-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cnvkit

and update with:

conda update cnvkit

or use the docker container:

docker pull quay.io/biocontainers/cnvkit:<tag>

(see cnvkit/tags for valid values for <tag>)