recipe crisper_recognition_tool

A tool for automatic detection of clustered regularly interspaced palindromic repeats (CRISPR).

Homepage:

http://www.room220.com/crt/

License:

Public domain software

Recipe:

/crisper_recognition_tool/meta.yaml

package crisper_recognition_tool

(downloads) docker_crisper_recognition_tool

versions:

1.2-2,  1.2-1,  1.2-0

depends openjdk:

>=6

depends python:

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install crisper_recognition_tool

and update with::

   mamba update crisper_recognition_tool

To create a new environment, run:

mamba create --name myenvname crisper_recognition_tool

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/crisper_recognition_tool:<tag>

(see `crisper_recognition_tool/tags`_ for valid values for ``<tag>``)

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Link to this page

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