recipe cutadapt

trim adapters from high-throughput sequencing reads

Homepage

https://cutadapt.readthedocs.io/

License

MIT License

Recipe

/cutadapt/meta.yaml

Links

biotools: cutadapt, doi: 10.14806/ej.17.1.200

package cutadapt

(downloads) docker_cutadapt

Versions

2.7-0, 2.6-0, 2.5-0, 2.4-0, 2.3-0, 2.2-0, 2.1-0, 2.0-0, 1.18-1, 1.18-0, 1.17-0, 1.16-2, 1.16-1, 1.16-0, 1.15-0, 1.14-0, 1.13-0, 1.12-1, 1.12-0, 1.11-0, 1.10-0, 1.9.1-0, 1.8.3-0, 1.8.1-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install cutadapt

and update with:

conda update cutadapt

or use the docker container:

docker pull quay.io/biocontainers/cutadapt:<tag>

(see cutadapt/tags for valid values for <tag>)