- recipe dadaist2
Command line wrapper to run DADA2 on a set of paired-end reads
- Homepage:
- Developer docs:
- License:
MIT
- Recipe:
- Links:
biotools: dadaist2, doi: 10.3390/ijms22105309
Command line wrapper to run DADA2 on a set of paired-end reads with several exporting tools to generate plots and numerical ecology analyses
- package dadaist2¶
-
- Versions:
1.2.5-0
,1.2.4-0
,1.2.1-0
,1.2.0-1
,1.2.0-0
,1.1.0-1
,1.1.0-0
,1.0.2-1
,1.0.2-0
,1.2.5-0
,1.2.4-0
,1.2.1-0
,1.2.0-1
,1.2.0-0
,1.1.0-1
,1.1.0-0
,1.0.2-1
,1.0.2-0
,1.0.1-1
,1.0.1-0
,0.9.0-0
,0.8.0-0
,0.7.7-1
,0.7.7-0
,0.7.5-0
,0.7.3-2
,0.7.3-1
,0.7.3-0
,0.6.0-1
,0.6.0-0
,0.4.00-2
,0.4.00-1
,0.4.00-0
,0.2.00-0
,0.1.04-0
- Depends:
bioconductor-dada2
>=1.18.0
biom-format
2.1.10.*
cutadapt
>=3.4
pandas
>=1.0
perl-fastx-reader
>=0.90
python
>=3.6
r-matrix
1.3-2.*
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install dadaist2
and update with:
conda update dadaist2
or use the docker container:
docker pull quay.io/biocontainers/dadaist2:<tag>
(see dadaist2/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/dadaist2/README.html)