recipe dbgraph

A graph-centric approach for metagenome-guided peptide identification in metaproteomics.

Homepage

https://github.com/COL-IU/graph2pro-var/tree/master/Graph2Pro

License

GNU General Public License

Recipe

/dbgraph/meta.yaml

Includes program DBGraph2Pro and DBGraphPep2Pro. Creates a peptide and protein database from graph generated from nucleotide sequencing data using MEGAHIT or MetaSpades. A graph-centric approach for metagenome-guided peptide identification in metaproteomics.

package dbgraph

(downloads) docker_dbgraph

Versions

1.0.0-0v1.0.0-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install dbgraph

and update with:

conda update dbgraph

or use the docker container:

docker pull quay.io/biocontainers/dbgraph:<tag>

(see dbgraph/tags for valid values for <tag>)