recipe desman

De novo Extraction of Strains from MetAgeNomes

Homepage:https://github.com/chrisquince/DESMAN License:BSD Recipe:/desman/meta.yaml Links:doi: 10.1186/s13059-017-1309-9

package desman

Versions:

2.1-1, 2.1-0

Depends:

• bcbiogff
• biopython
• cython
• gsl >=2.2.1,<2.3.0a0
• numpy
• pandas
• perl
• pysam
• python >=3.5,<3.6.0a0
• r-getopt
• r-ggplot2
• r-labeling
• r-reshape
• scikit-learn
• scipy

Required By:

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install desman

and update with:

conda update desman

or use the docker container:

docker pull quay.io/biocontainers/desman:<tag>

(see desman/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/desman/README.html)