recipe dunovo

Du Novo: A pipeline for processing duplex sequencing data.

Homepage:

https://github.com/galaxyproject/dunovo

License:

GPL2

Recipe:

/dunovo/meta.yaml

package dunovo

Versions:

3.0.2-1,  3.0.2-0,  2.16-0,  2.15-4,  2.15-3,  2.15-2,  2.15-1,  2.15-0,  2.14-0, 

3.0.2-1,  3.0.2-0,  2.16-0,  2.15-4,  2.15-3,  2.15-2,  2.15-1,  2.15-0,  2.14-0,  2.0.12-0,  2.0.9-0,  2.0.8-0,  2.0.6-0,  0.8.1-0,  0.7.6-1,  0.7.6-0,  0.7.5-0,  0.7.4-0,  0.7.1-0,  0.7-0

Depends:

• bash >=4.0.0

• biopython 1.78.*

• bowtie >=1.3.0

• coreutils

• file

• gawk

• gzip

• libgcc-ng >=10.3.0

• mafft 7.221.*

• networkx 2.4.*

• python >=3.6

• samtools 1.9.*

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install dunovo

and update with:

conda update dunovo

or use the docker container:

docker pull quay.io/biocontainers/dunovo:<tag>

(see dunovo/tags for valid values for <tag>)

Download stats

Link to this page

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