recipe duphold

SV callers like lumpy look at split-reads and pair distances to find structural variants. This tool is a fast way to add depth information to those calls.

Homepage

https://github.com/brentp/duphold

License

MIT

Recipe

/duphold/meta.yaml

package duphold

(downloads) docker_duphold

Versions

0.1.2-0, 0.1.1-0, 0.1.0-0, 0.0.9-0, 0.0.6-0, 0.0.3-0, 0.0.2-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install duphold

and update with:

conda update duphold

or use the docker container:

docker pull quay.io/biocontainers/duphold:<tag>

(see duphold/tags for valid values for <tag>)