recipe epic2

Ultraperformant Chip-Seq broad domain finder based on SICER.

Homepage

http://github.com/endrebak/epic2

License

MIT

Recipe

/epic2/meta.yaml

package epic2

(downloads) docker_epic2

Versions

0.0.36-0, 0.0.35-0, 0.0.34-0, 0.0.33-0, 0.0.26-0, 0.0.16-0, 0.0.15-0

Depends functools32

Depends htslib

>=1.9,<1.10.0a0

Depends libdeflate

>=1.0,<1.1.0a0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Depends natsort

Depends numpy

Depends pysam

Depends python

>=2.7,<2.8.0a0

Depends scipy

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install epic2

and update with:

conda update epic2

or use the docker container:

docker pull quay.io/biocontainers/epic2:<tag>

(see epic2/tags for valid values for <tag>)