recipe estmapper

Software package for the high-throughput alignment of large cDNA (EST, mRNA) sequence sets to a large eukaryotic genome of the same species.

Homepage

http://kmer.sourceforge.net/wiki/index.php/Getting_Started_with_ESTmapper

License

GPL

Recipe

/estmapper/meta.yaml

package estmapper

(downloads) docker_estmapper

Versions

2008-2, 2008-1, 2008-0

Depends bzip2

>=1.0.6,<2.0a0

Depends libgcc-ng

>=4.9

Depends libstdcxx-ng

>=4.9

Depends perl

>=5.26.2,<5.26.3.0a0

Depends python

>=2.7,<2.8.0a0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install estmapper

and update with:

conda update estmapper

or use the docker container:

docker pull quay.io/biocontainers/estmapper:<tag>

(see estmapper/tags for valid values for <tag>)