recipe export2graphlan

export2graphlan is a conversion software tool for producing both annotation and tree file for GraPhlAn. It automatically generate the input tree and the annotation file for GraPhlAn, starting from the input/output of MetaPhlAn, LEfSe, and HUMAnN. It supports also the biom file format. The annotation file will highlight specific sub-trees/clades automatically inferred from input file(s) provided. The two output file of export2graphlan should then be used with GraPhlAn.

Homepage:https://bitbucket.org/CibioCM/export2graphlan/overview
License:MIT / MIT License
Recipe:/export2graphlan/meta.yaml
package export2graphlan

(downloads) docker_export2graphlan

Versions:

0.20-0, 0.19-2, 0.19-1, 0.19-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install export2graphlan

and update with:

conda update export2graphlan

or use the docker container:

docker pull quay.io/biocontainers/export2graphlan:<tag>

(see export2graphlan/tags for valid values for <tag>)