- recipe export2graphlan
Conversion software tool for annotating tree with GraPhlAn
- Homepage:
- License:
MIT / MIT License
- Recipe:
export2graphlan is a conversion software tool for producing both annotation and tree file for GraPhlAn. It automatically generate the input tree and the annotation file for GraPhlAn, starting from the input/output of MetaPhlAn, LEfSe, and HUMAnN. It supports also the biom file format. The annotation file will highlight specific sub-trees/clades automatically inferred from input file(s) provided. The two output file of export2graphlan should then be used with GraPhlAn.
- package export2graphlan¶
-
- Versions:
0.22-0
,0.20-0
,0.19-2
,0.19-1
,0.19-0
- Depends:
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install export2graphlan
and update with:
conda update export2graphlan
or use the docker container:
docker pull quay.io/biocontainers/export2graphlan:<tag>
(see export2graphlan/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/export2graphlan/README.html)