recipe export2graphlan

Conversion software tool for annotating tree with GraPhlAn



MIT / MIT License



export2graphlan is a conversion software tool for producing both annotation and tree file for GraPhlAn. It automatically generate the input tree and the annotation file for GraPhlAn, starting from the input/output of MetaPhlAn, LEfSe, and HUMAnN. It supports also the biom file format. The annotation file will highlight specific sub-trees/clades automatically inferred from input file(s) provided. The two output file of export2graphlan should then be used with GraPhlAn.

package export2graphlan

(downloads) docker_export2graphlan


0.22-0, 0.20-0, 0.19-2, 0.19-1, 0.19-0

Required By


With an activated Bioconda channel (see 2. Set up channels), install with:

conda install export2graphlan

and update with:

conda update export2graphlan

or use the docker container:

docker pull<tag>

(see export2graphlan/tags for valid values for <tag>)