gap2seq

downloads

Gap2Seq is a tool for filling gaps between contigs in genome assemblies.

Home https://www.cs.helsinki.fi/u/lmsalmel/Gap2Seq/
Versions 2.0, 2.1
License GPLv3
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/gap2seq

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install gap2seq

and update with:

conda update gap2seq

Notes

Gap2Seq is only tested on Linux x86_64 by its author.

docker

A Docker container is available at https://quay.io/repository/biocontainers/gap2seq.