recipe genomepy

Download genomes the easy way.

Homepage

https://github.com/simonvh/genomepy

License

MIT / MIT License

Recipe

/genomepy/meta.yaml

package genomepy

(downloads) docker_genomepy

Versions

0.5.5-0, 0.5.4-1, 0.5.4-0, 0.5.2-2, 0.5.2-1, 0.5.1-0, 0.5.0-0, 0.4.0-0, 0.3.1-0

Depends bucketcache

>=0.12.1

Depends click

Depends norns

>=0.1.4

Depends pyfaidx

>=0.5.1

Depends pytest

Depends python

>=2.7,<2.8.0a0

Depends requests

Depends ucsc-bedtogenepred

Depends ucsc-genepredtobed

Depends ucsc-genepredtogtf

Depends ucsc-gtftogenepred

Depends xmltodict

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install genomepy

and update with:

conda update genomepy

or use the docker container:

docker pull quay.io/biocontainers/genomepy:<tag>

(see genomepy/tags for valid values for <tag>)