recipe genonets

Framework for creating and analyzing genotype networks from data.

Homepage:

https://github.com/fkhalid/genonets

License:

MIT / MIT License

Recipe:

/genonets/meta.yaml

Links:

biotools: genonets, doi: 10.1093/nar/gkw313

package genonets

(downloads) docker_genonets

versions:

2.0-0,  1.1.10-0,  1.1.8-0,  1.1.6-2,  1.1.6-1,  1.1.6-0

depends numpy:

>=1.19

depends python:

depends python-igraph:

>=0.8.2

depends tqdm:

>=4.49.0

requirements:

Installation

You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).

While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.

Given that you already have a conda environment in which you want to have this package, install with:

   mamba install genonets

and update with::

   mamba update genonets

To create a new environment, run:

mamba create --name myenvname genonets

with myenvname being a reasonable name for the environment (see e.g. the mamba docs for details and further options).

Alternatively, use the docker container:

   docker pull quay.io/biocontainers/genonets:<tag>

(see `genonets/tags`_ for valid values for ``<tag>``)

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