recipe group_humann2_uniref_abundances_to_go

Group abundances of UniRef50 gene families obtained with HUMAnN2 to Gene Ontology (GO) slim terms with relative abundances

Homepage:

https://github.com/ASaiM/group_humann2_uniref_abundances_to_GO

License:

Apache 2

Recipe:

/group_humann2_uniref_abundances_to_go/meta.yaml

package group_humann2_uniref_abundances_to_go

Versions:

1.3.0-0,  1.2.3-0,  1.2.1-0,  1.2.0-2,  1.2.0-1,  1.2.0-0

Depends:

• goatools

• humann2

• python <3

• wget

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install group_humann2_uniref_abundances_to_go

and update with:

conda update group_humann2_uniref_abundances_to_go

or use the docker container:

docker pull quay.io/biocontainers/group_humann2_uniref_abundances_to_go:<tag>

(see group_humann2_uniref_abundances_to_go/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/group_humann2_uniref_abundances_to_go/README.html)