recipe group_humann2_uniref_abundances_to_go

Group abundances of UniRef50 gene families obtained with HUMAnN2 to Gene Ontology (GO) slim terms with relative abundances

Homepage

https://github.com/ASaiM/group_humann2_uniref_abundances_to_GO

License

Apache 2

Recipe

/group_humann2_uniref_abundances_to_go/meta.yaml

package group_humann2_uniref_abundances_to_go

Versions

1.3.0-0,  1.2.3-0,  1.2.1-0,  1.2.0-2,  1.2.0-1,  1.2.0-0

Depends

• goatools

• humann2

• python <3

• wget

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install group_humann2_uniref_abundances_to_go

and update with:

conda update group_humann2_uniref_abundances_to_go

or use the docker container:

docker pull quay.io/biocontainers/group_humann2_uniref_abundances_to_go:<tag>

(see group_humann2_uniref_abundances_to_go/tags for valid values for <tag>)

Link to this page

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