recipe gunc

Python package for detection of chimerism and contamination in prokaryotic genomes.

Homepage:

https://github.com/grp-bork/gunc

Documentation:

https://grp-bork.embl-community.io/gunc/

License:

GPL3 / GNU General Public v3 or later (GPLv3+)

Recipe:

/gunc/meta.yaml

package gunc

Versions:

1.0.5-0,  1.0.4-0,  1.0.3-0,  1.0.2-0,  1.0.1-0,  1.0.0-0

Depends:

• diamond 2.0.4.*

• numpy

• pandas

• plotly

• prodigal

• python >=3.6

• requests >=2.22.0

• scipy

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install gunc

and update with:

conda update gunc

or use the docker container:

docker pull quay.io/biocontainers/gunc:<tag>

(see gunc/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/gunc/README.html)