recipe hg-color

HG-CoLoR (Hybrid Graph for the error Correction of Long Reads) is a hybrid method for the error correction of long reads that follows the main idea from NaS to produce corrected long reads from assemblies of related accurate short reads.

Homepage

https://github.com/pierre-morisse/HG-CoLoR

License

GNU General Public License (GPL)

Recipe

/hg-color/meta.yaml

package hg-color

Versions

1.1.1-1,  1.1.1-0,  1.0.0-3,  1.0.0-2,  1.0.0-1

Depends

• coreutils

• emboss

• kmc

• libgcc-ng >=7.3.0

• libstdcxx-ng >=7.3.0

• parallel

• pgsa

• python

• quorum

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hg-color

and update with:

conda update hg-color

or use the docker container:

docker pull quay.io/biocontainers/hg-color:<tag>

(see hg-color/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/hg-color/README.html)