-
recipe
hisat2
¶ graph-based alignment of next generation sequencing reads to a population of genomes
- Homepage
- License
GPLv3
- Recipe
- Links
biotools: HISAT2, doi: 10.1038/nmeth.3317
-
package
hisat2
¶ -
- Versions
2.1.0-4, 2.1.0-3, 2.1.0-2, 2.1.0-1, 2.1.0-0, 2.0.5-2, 2.0.5-1, 2.0.4-1, 2.0.4-0, 2.0.3beta-0, 2.0.2beta-0, 2.0.1beta-0, 2.0.0beta-0
- Depends
libgcc-ng >=7.3.0
libstdcxx-ng >=7.3.0
python >=2.7,<2.8.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install hisat2
and update with:
conda update hisat2
or use the docker container:
docker pull quay.io/biocontainers/hisat2:<tag>
(see hisat2/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/hisat2/README.html)