recipe hotspot3d

This 3D proximity tool can be used to identify mutation hotspots from linear protein sequence and correlate the hotspots with known or potentially interacting domains, mutations, or drugs. Mutation-mutation and mutation-drug clusters can also be identified and viewed.

Homepage:

https://github.com/ding-lab/hotspot3d

License:

GPL / GPLv3

Recipe:

/hotspot3d/meta.yaml

package hotspot3d

Versions:

1.8.2-3,  1.8.2-2,  1.8.2-1,  1.8.2-0,  0.6.0-0

Depends:

• perl >=5.32.1,<6.0a0 *_perl5

• perl-archive-extract

• perl-json

• perl-list-moreutils

• perl-lwp-simple >=6.39

• perl-parallel-forkmanager

• perl-test-most

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install hotspot3d

and update with:

conda update hotspot3d

or use the docker container:

docker pull quay.io/biocontainers/hotspot3d:<tag>

(see hotspot3d/tags for valid values for <tag>)

Download stats

Link to this page

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