recipe hpsuissero

Rapid Haemophilus parasuis serotyping pipeline for Nanopore Data

Homepage

https://github.com/jimmyliu1326/HpsuisSero

License

MIT

Recipe

/hpsuissero/meta.yaml

package hpsuissero

Versions

1.0.0-1,  1.0.0-0

Depends

• blast >=2.6

• flye >=2.7.1

• medaka 1.0.1

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hpsuissero

and update with:

conda update hpsuissero

or use the docker container:

docker pull quay.io/biocontainers/hpsuissero:<tag>

(see hpsuissero/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/hpsuissero/README.html)