recipe htslib

C library for high-throughput sequencing data formats.

Homepage

https://github.com/samtools/htslib

License

MIT

Recipe

/htslib/meta.yaml

Links

biotools: HTSlib

package htslib

(downloads) docker_htslib

Versions

1.9-7, 1.9-6, 1.9-5, 1.9-4, 1.9-3, 1.9-2, 1.9-1, 1.9-0, 1.8-2, 1.8-1, 1.8-0, 1.7-0, 1.6-0, 1.5-0, 1.4.1-0, 1.4-0, 1.3.2-0, 1.3.1-1, 1.3.1-0, 1.3-1, 1.3-0, 1.2.1-0

Depends
  • bzip2 >=1.0.6,<2.0a0

  • curl >=7.64.0,<8.0a0

  • libdeflate >=1.0,<1.1.0a0

  • libgcc-ng >=7.3.0

  • xz >=5.2.4,<5.3.0a0

  • zlib >=1.2.11,<1.3.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install htslib

and update with:

conda update htslib

or use the docker container:

docker pull quay.io/biocontainers/htslib:<tag>

(see htslib/tags for valid values for <tag>)