recipe humann

HUMAnN: The HMP Unified Metabolic Analysis Network, version 3

Homepage:

http://huttenhower.sph.harvard.edu/humann

Developer docs:

https://github.com/biobakery/humann

License:

MIT / MIT

Recipe:

/humann/meta.yaml

package humann

Versions:

3.6.1-1,  3.6.1-0,  3.6-2,  3.6-1,  3.6-0,  3.5-0,  3.1.1-1,  3.1.1-0,  3.1.0-0, 

3.6.1-1,  3.6.1-0,  3.6-2,  3.6-1,  3.6-0,  3.5-0,  3.1.1-1,  3.1.1-0,  3.1.0-0,  3.0.1-0,  3.0.0-1,  3.0.0-0,  3.0.0a4-0

Depends:

• bowtie2 >2.1

• diamond >=0.9.36

• glpk

• metaphlan >=4.0

• python

Required By:

• quantpi

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install humann

and update with:

conda update humann

or use the docker container:

docker pull quay.io/biocontainers/humann:<tag>

(see humann/tags for valid values for <tag>)

Download stats

Link to this page

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