recipe hyphy

An open-source software package for comparative sequence analysis using stochastic evolutionary models.

Homepage:

http://hyphy.org/

Developer docs:

https://github.com/veg/hyphy

License:

MIT / MIT

Recipe:

/hyphy/meta.yaml

HyPhy (Hypothesis Testing using Phylogenies) is an open-source software package for the analysis of genetic sequences (in particular the inference of natural selection) using techniques in phylogenetics, molecular evolution, and machine learning.

package hyphy

(downloads) docker_hyphy

Versions:
2.5.42-02.5.41-12.5.41-02.5.40-12.5.40-02.5.39-02.5.38-02.5.36-12.5.36-0

2.5.42-02.5.41-12.5.41-02.5.40-12.5.40-02.5.39-02.5.38-02.5.36-12.5.36-02.5.33-02.5.32-02.5.31-02.5.30-12.5.30-02.5.29-12.5.29-02.5.28-02.5.26-02.5.25-02.5.24-02.5.23-02.5.22.1-02.5.22-02.5.21-02.5.20-02.5.19-02.5.17-02.5.16-02.5.15-02.5.14-02.5.12-12.5.12-02.5.11-02.5.10-02.5.9-02.5.8-12.5.8-02.5.7-02.5.6-02.5.5-02.5.4-12.5.4-02.5.3-02.5.2-12.5.2-02.5.1-12.5.1-02.5.0-12.5.0-02.3.14-12.3.14-02.3.12-12.3.12-02.3.11-22.3.11-12.3.11-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install hyphy

and update with:

conda update hyphy

or use the docker container:

docker pull quay.io/biocontainers/hyphy:<tag>

(see hyphy/tags for valid values for <tag>)

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