recipe hyphy

An open-source software package for comparative sequence analysis using stochastic evolutionary models.

Homepage

http://hyphy.org/

Developer docs

https://github.com/veg/hyphy

License

MIT / MIT

Recipe

/hyphy/meta.yaml

HyPhy (Hypothesis Testing using Phylogenies) is an open-source software package for the analysis of genetic sequences (in particular the inference of natural selection) using techniques in phylogenetics, molecular evolution, and machine learning.

package hyphy

(downloads) docker_hyphy

Versions

2.5.0-1, 2.5.0-0, 2.3.14-1, 2.3.14-0, 2.3.12-1, 2.3.12-0, 2.3.11-1, 2.3.11-0

Depends curl

>=7.64.1,<8.0a0

Depends libgcc-ng

>=7.3.0

Depends libstdcxx-ng

>=7.3.0

Requirements

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install hyphy

and update with:

conda update hyphy

or use the docker container:

docker pull quay.io/biocontainers/hyphy:<tag>

(see hyphy/tags for valid values for <tag>)