- recipe jass
Computation of joint statistics over sets of GWAS results
- Homepage:
- License:
MIT / MIT
- Recipe:
- package jass¶
- versions:
2.3-0,2.2-0,2.0-0,1.0.1-0- depends aiohttp:
- depends aiosignal:
- depends amqp:
- depends anyio:
- depends apispec:
- depends async-timeout:
- depends attrs:
- depends billiard:
- depends blinker:
- depends blosc:
- depends celery:
- depends certifi:
- depends charset-normalizer:
- depends click:
- depends click-didyoumean:
- depends click-plugins:
- depends click-repl:
- depends contourpy:
- depends cycler:
- depends exceptiongroup:
- depends fastapi:
- depends flask:
- depends flask-cors:
- depends flask-smorest:
- depends fonttools:
- depends frozenlist:
- depends h11:
- depends httpcore:
- depends httptools:
- depends httpx:
- depends idna:
- depends importlib-metadata:
- depends itsdangerous:
- depends jinja2:
- depends kiwisolver:
- depends kombu:
- depends markupsafe:
- depends marshmallow:
- depends matplotlib-base:
- depends msgpack-python:
- depends multidict:
- depends ndindex:
- depends numexpr:
- depends numpy:
- depends packaging:
- depends pandas:
- depends pillow:
- depends prompt-toolkit:
- depends py-cpuinfo:
- depends pydantic:
<2.0- depends pyparsing:
- depends python:
>=3.10- depends python-dateutil:
- depends python-dotenv:
- depends pytz:
- depends pyyaml:
- depends requests:
- depends scipy:
- depends seaborn:
- depends six:
- depends sniffio:
- depends starlette:
- depends tables:
- depends typing_extensions:
- depends tzdata:
- depends urllib3:
- depends uvicorn:
- depends uvloop:
- depends vine:
- depends watchfiles:
- depends wcwidth:
- depends webargs:
- depends websockets:
- depends werkzeug:
- depends yarl:
- depends zipp:
- requirements:
- additional platforms:
Installation
You need a conda-compatible package manager (currently either micromamba, mamba, or conda) and the Bioconda channel already activated (see set-up-channels).
While any of above package managers is fine, it is currently recommended to use either micromamba or mamba (see here for installation instructions). We will show all commands using mamba below, but the arguments are the same for the two others.
Given that you already have a conda environment in which you want to have this package, install with:
mamba install jass and update with:: mamba update jass
To create a new environment, run:
mamba create --name myenvname jass
with
myenvnamebeing a reasonable name for the environment (see e.g. the mamba docs for details and further options).Alternatively, use the docker container:
docker pull quay.io/biocontainers/jass:<tag> (see `jass/tags`_ for valid values for ``<tag>``)
Download stats¶
Link to this page¶
Render an 
badge with the following MarkDown:
[](http://bioconda.github.io/recipes/jass/README.html)
